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Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida
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Bombarely, Aureliano
Department of Horticulture, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, USA
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Moser, Michel
Institute of Plant Sciences, University of Bern, Switzerland
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Amrad, Avichai
Institute of Plant Sciences, University of Bern, Switzerland
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Bao, Manzhu
Huazhong Agricultural University, China
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Bapaume, Laure
Department of Biology, University of Fribourg, Fribourg, Switzerland
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Barry, Cornelius S.
Department of Horticulture, Michigan State University, East Lansing, USA
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Bliek, Mattijs
Department of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, The Netherlands
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Boersma, Maaike R.
Department of Plant Physiology, University of Amsterdam, The Netherlands
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Borghi, Lorenzo
Institute of Plant and Microbiology, University of Zürich, Switzerland
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Bruggmann, Rémy
Interfaculty Bioinformatics Unit, University of Bern, Switzerland
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Bucher, Marcel
Cologne Biocenter, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Germany
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D'Agostino, Nunzio
Consiglio per la Ricerca in Agricoltura e l’analisi dell’economia agraria, Centro di Ricerca per l’Orticoltura (CREA-ORT), Pontecagnano (Sa) Italy
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Davies, Kevin
Department of Breeding and Genomics, Plant and Food Research, Auckland, New Zealand
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Druege, Uwe
Department of Plant Propagation, Leibniz Institute of Vegetable and Ornamental Crops (IGZ), Erfurt, Germany
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Dudareva, Natalia
Department of Biochemistry, Purdue University, West Lafayette, Indiana USA
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Egea-Cortines, Marcos
Instituto de Biotecnología Vegetal, Universidad Politécnica de Cartagena, Spain
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Delledonne, Massimo
Dipartimento di Biotecnologie, Universita degli Studi di Verona, Italy
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Fernandez-Pozo, Noe
Boyce Thompson Institute for Plant Research, Ithaca, New York, USA
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Franken, Philipp
Department of Plant Propagation, Leibniz Institute of Vegetable and Ornamental Crops (IGZ), Erfurt, Germany
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Grandont, Laurie
Biosystematics Group, Wageningen University and Research Center, Wageningen, The Netherlands
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Heslop-Harrison, J. S.
Department of Genetics, University of Leicester, University Road, UK
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Hintzsche, Jennifer
Department of Biological Sciences, Northern Illinois University, USA
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Johns, Mitrick
Department of Biological Sciences, Northern Illinois University, USA
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Koes, Ronald
Department of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, The Netherlands
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Lv, Xiaodan
Beijing Genomics Institute, Shenzhen, China
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Lyons, Eric
School of Plant Sciences, iPlant Collaborative, University of Arizona, Tucson, USA
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Malla, Diwa
Department of Biological Sciences, Northern Illinois University, USA
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Martinoia, Enrico
Institute of Plant and Microbiology, University of Zürich, Switzerland
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Mattson, Neil S.
School of Integrative Plant Science, Cornell University, Cornell University, Ithaca, New York, USA
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Morel, Patrice
Laboratoire Reproduction et Développement des Plantes (RDP), ENS de Lyon/CNRS/INRA/UCBL, Lyon, France
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Mueller, Lukas A.
Boyce Thompson Institute for Plant Research, Ithaca, New York, USA
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Muhlemann, Joëlle
Department of Biochemistry, Purdue University, West Lafayette, Indiana USA
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Nouri, Eva
Department of Biology, University of Fribourg, Fribourg, Switzerland
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Passeri, Valentina
Department of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, The Netherlands
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Pezzotti, Mario
Dipartimento di Biotecnologie, Universita degli Studi di Verona, Italy
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Qi, Qinzhou
Department of Biological Sciences, Northern Illinois University, USA
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Reinhardt, Didier
Department of Biology, University of Fribourg, Fribourg, Switzerland
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Rich, Melanie
Department of Biology, University of Fribourg, Fribourg, Switzerland
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Richert-Pöggeler, Katja R.
Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn-Institut (JKI), Federal Research Centre for Cultivated Plants, Braunschweig, Germany
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Robbins, Tim P.
Department of Crop and Plant Sciences, University of Nottingham, Sutton Bonington, Leicestershire, UK
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Schatz, Michael C.
Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA
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Schranz, M. Eric
Biosystematics Group, Wageningen University and Research Center, Wageningen, The Netherlands
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Schuurink, Robert C.
Department of Plant Physiology, University of Amsterdam, The Netherlands
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Schwarzacher, Trude
Department of Genetics, University of Leicester, University Road, UK
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Spelt, Kees
Department of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, The Netherlands
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Tang, Haibao
School of Plant Sciences, iPlant Collaborative, University of Arizona, Tucson, USA
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Urbanus, Susan L.
Department of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, The Netherlands
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Vandenbussche, Michiel
Laboratoire Reproduction et Développement des Plantes (RDP), ENS de Lyon/CNRS/INRA/UCBL, Lyon, France
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Vijverberg, Kitty
Radboud University, FNWI, IWWR, Nijmegen, The Netherlands
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Villarino, Gonzalo H.
School of Integrative Plant Science, Cornell University, Cornell University, Ithaca, New York, USA
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Warner, Ryan M.
Department of Horticulture, Michigan State University, East Lansing, USA
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Weiss, Julia
Instituto de Biotecnología Vegetal, Universidad Politécnica de Cartagena, Spain
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Yue, Zhen
Beijing Genomics Institute, Shenzhen, China
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Zethof, Jan
Radboud University, FNWI, IWWR, Nijmegen, The Netherlands
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Quattrocchio, Francesca
Department of Plant Development and (Epi)Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, The Netherlands
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Sims, Thomas L.
Department of Biological Sciences, Northern Illinois University, USA
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Kuhlemeier, Cris
Institute of Plant Sciences, University of Bern, Switzerland
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Published in:
- Nature Plants. - 2016, vol. 2, p. 16074
English
Petunia hybrida is a popular bedding plant that has a long history as a genetic model system. We report the whole-genome sequencing and assembly of inbred derivatives of its two wild parents, P. axillaris N and P. inflata S6. The assemblies include 91.3% and 90.2% coverage of their diploid genomes (1.4 Gb; 2n = 14) containing 32,928 and 36,697 protein-coding genes, respectively. The genomes reveal that the Petunia lineage has experienced at least two rounds of hexaploidization: the older gamma event, which is shared with most Eudicots, and a more recent Solanaceae event that is shared with tomato and other solanaceous species. Transcription factors involved in the shift from bee to moth pollination reside in particularly dynamic regions of the genome, which may have been key to the remarkable diversity of floral colour patterns and pollination systems. The high-quality genome sequences will enhance the value of Petunia as a model system for research on unique biological phenomena such as small RNAs, symbiosis, self-incompatibility and circadian rhythms.
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Faculty
- Faculté des sciences et de médecine
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Department
- Département de Biologie
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Language
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Classification
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Biological sciences
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License
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License undefined
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Identifiers
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Persistent URL
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https://folia.unifr.ch/unifr/documents/305005
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