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Journal article

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Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef)

Université de Fribourg

  • Cannarozzi, Gina University of Bern, Institute of Plant Sciences, Switzerland - Swiss Institute of Bioinformatics, Vital-IT, Lausanne, Switzerland
  • Plaza-Wüthrich, Sonia University of Bern, Institute of Plant Sciences, Switzerland
  • Esfeld, Korinna University of Bern, Institute of Plant Sciences, Switzerland
  • Larti, Stéphanie Current address: University of Bern, Clinic for Parodontology, Freiburgstrasse 7, Bern CH-3010, Switzerland
  • Wilson, Yi Song University of Bern, Institute of Plant Sciences, Switzerland
  • Girma, Dejene Ethiopian Institute of Agricultural Research, National Biotechnology Laboratory (Holetta, Addis Ababa, Ethiopia
  • Castro, Edouard de Swiss Institute of Bioinformatics, Geneva, Switzerland
  • Chanyalew, Solomon Ethiopian Institute of Agricultural Research, Debre Zeit Agricultural Research Center, Debre Zeit, Ethiopia
  • Blösch, Regula University of Bern, Institute of Plant Sciences, Switzerland
  • Farinelli, Laurent Fasteris SA, Plan-les-Ouates, Switzerland
  • Lyons, Eric Univerisity of Arizona, School of Plant Sciences, 1140 E. South Campus Drive, 303 Forbes Building, P.O. Box 210036, Tucson, AZ 85721-0036, USA
  • Schneider, Michel Swiss Institute of Bioinformatics, Geneva, Switzerland
  • Falquet, Laurent Current address: University of Fribourg, Faculty of Science, Ch. du Musée 10, Fribourg CH-1700, Switzerland
  • Kuhlemeier, Cris University of Bern, Institute of Plant Sciences, Switzerland
  • Assefa, Kebebew Ethiopian Institute of Agricultural Research, Debre Zeit Agricultural Research Center, Debre Zeit, Ethiopia
  • Tadele, Zerihun University of Bern, Institute of Plant Sciences, Switzerland
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    09.07.2014
Published in:
  • BMC Genomics, 2014, vol. 15, no. 1, p. 581
English Background: Tef (Eragrostis tef), an indigenous cereal critical to food security in the Horn of Africa, is rich in minerals and protein, resistant to many biotic and abiotic stresses and safe for diabetics as well as sufferers of immune reactions to wheat gluten. We present the genome of tef, the first species in the grass subfamily Chloridoideae and the first allotetraploid assembled de... Show more…
Language
  • English
Identifiers
Classification
Biology
Faculty
Faculté des sciences et de médecine
Department
Département de Biologie
License
License undefined
Persistent URL
https://folia.unifr.ch/global/documents/303736
Other files

Alignment of tef KO2 A and B copies
Alignment of tef KO2 A and B copies
Supplementary Notes, Supplementary Figures and Supplementary Tables and references.
Supplementary Notes, Supplementary Figures and Supplementary Tables and references.
Location of SSR markers in the tef genome
Location of SSR markers in the tef genome
Alignment of A and B genomes
Alignment of A and B genomes
Location of tef CNLT markers in the pseudo-chromosomes of tef ordered by linkage group
Location of tef CNLT markers in the pseudo-chromosomes of tef ordered by linkage group
Location of tef CNLT markers in the pseudo-chromosomes of tef ordered by linkage group
Location of tef CNLT markers in the pseudo-chromosomes of tef ordered by linkage group
ist of selected SSRs identified from scaffolds
ist of selected SSRs identified from scaffolds