openBIS ELN-LIMS: an open-source database for academic laboratories.
- Barillari C ETH Zurich ID SIS and Swiss Institute of Bioinformatics, 8092 Zurich, Switzerland.
- Ottoz DS ETH Zurich D-BSSE and Swiss Institute of Bioinformatics, 4058 Basel, Switzerland and Life Science Zurich PhD Program on Molecular and Translational Biomedicine and Competence Center for Personalized Medicine, 8092 Zurich, Switzerland.
- Fuentes-Serna JM ETH Zurich ID SIS and Swiss Institute of Bioinformatics, 8092 Zurich, Switzerland.
- Ramakrishnan C ETH Zurich ID SIS and Swiss Institute of Bioinformatics, 8092 Zurich, Switzerland.
- Rinn B ETH Zurich ID SIS and Swiss Institute of Bioinformatics, 8092 Zurich, Switzerland.
- Rudolf F ETH Zurich D-BSSE and Swiss Institute of Bioinformatics, 4058 Basel, Switzerland and.
- 2015-10-29
Published in:
- Bioinformatics (Oxford, England). - 2016
Biological Science Disciplines
Computer Systems
Databases, Factual
Information Management
Information Systems
Laboratories
Software
User-Computer Interface
English
UNLABELLED
The open-source platform openBIS (open Biology Information System) offers an Electronic Laboratory Notebook and a Laboratory Information Management System (ELN-LIMS) solution suitable for the academic life science laboratories. openBIS ELN-LIMS allows researchers to efficiently document their work, to describe materials and methods and to collect raw and analyzed data. The system comes with a user-friendly web interface where data can be added, edited, browsed and searched.
AVAILABILITY AND IMPLEMENTATION
The openBIS software, a user guide and a demo instance are available at https://openbis-eln-lims.ethz.ch. The demo instance contains some data from our laboratory as an example to demonstrate the possibilities of the ELN-LIMS (Ottoz et al., 2014). For rapid local testing, a VirtualBox image of the ELN-LIMS is also available.
The open-source platform openBIS (open Biology Information System) offers an Electronic Laboratory Notebook and a Laboratory Information Management System (ELN-LIMS) solution suitable for the academic life science laboratories. openBIS ELN-LIMS allows researchers to efficiently document their work, to describe materials and methods and to collect raw and analyzed data. The system comes with a user-friendly web interface where data can be added, edited, browsed and searched.
AVAILABILITY AND IMPLEMENTATION
The openBIS software, a user guide and a demo instance are available at https://openbis-eln-lims.ethz.ch. The demo instance contains some data from our laboratory as an example to demonstrate the possibilities of the ELN-LIMS (Ottoz et al., 2014). For rapid local testing, a VirtualBox image of the ELN-LIMS is also available.
- Language
-
- English
- Open access status
- green
- Identifiers
-
- DOI 10.1093/bioinformatics/btv606
- PMID 26508761
- Persistent URL
- https://folia.unifr.ch/global/documents/127190
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