"Supplementary Table S3: GeneSet analysis. The analysis was performed following the procedure of Daub et al 2013 for (A) the P-values for the factor ""Developmental diet"" of the GLM analysis, (B) the P-values for the factor ""Age-at-reproduction"" of the GLM analysis, and (C) the P-values for the factor ""Interaction"" of the GLM analysis. The sets with P < 0.05 are shown." "A: GeneSet analysis for ""Developmental diet""" setID setSize setScore P FDR setName setID.orig 575 20 0.005437867 0.00816289 0.932540922 G0 and Early G1 1372756 361 58 0.415679863 0.011271086 0.932540922 Metabolism of nucleotides 1372977 246 24 0.491645591 0.017468905 0.932540922 COPI-independent Golgi-to-ER retrograde traffic 1373096 492 12 1.84E-05 0.018207078 0.932540922 HS-GAG degradation 1372843 703 12 0.248733817 0.021324911 0.932540922 RNA Polymerase I Transcription Initiation 1372626 531 23 0.206433493 0.02250425 0.932540922 APC-Cdc20 mediated degradation of Nek2A 1372803 133 16 1.92E-06 0.03200605 0.932540922 MET promotes cell motility 1457846 304 13 0.000809472 0.033459777 0.932540922 Metabolism of porphyrins 1373035 1012 12 1.54E-10 0.034766435 0.932540922 Signaling by Robo receptor 1372314 1696 33 0.00152349 0.035399764 0.932540922 Starch and sucrose metabolism* 344 625 10 0.075155367 0.035956886 0.932540922 Translesion synthesis by REV1* 1372705 876 11 0.042029234 0.047126844 0.999048292 Calnexin/calreticulin cycle 1372451 "B: GeneSet analysis for ""Age-at-reproduction""" setID setSize setScore P FDR setName setID.orig 1678 18 0.871360854 0.0081516 0.578133338 Thiamine metabolism* 397 365 35 1.230867913 0.010908672 0.578133338 Complex I biogenesis 1372973 1160 33 0.017727688 0.012529969 0.578133338 GPCR ligand binding 1372163 886 136 1.455550787 0.014999956 0.578133338 Asparagine N-linked glycosylation 1372441 1124 14 0.019436297 0.015433287 0.578133338 Beta-catenin phosphorylation cascade 1372199 1669 42 0.100883955 0.021104079 0.578133338 Aminoacyl-tRNA biosynthesis* 424 1126 13 0.051663459 0.024133218 0.578133338 WNT ligand biogenesis and trafficking 1372197 379 13 0.024578494 0.024190361 0.578133338 Metabolism of nitric oxide* 1372959 1833 22 0.623659966 0.025739871 0.578133338 ABC transporters* 436 988 73 1.256907652 0.026309868 0.578133338 Mitochondrial translation* 1372339 472 29 0.030528739 0.034726435 0.578133338 LDL-mediated lipid transport 1372863 943 10 0.005381205 0.037135449 0.578133338 Activation of Na-permeable Kainate Receptors* 1372384 310 21 0.071799682 0.037542589 0.578133338 Sulfur amino acid metabolism 1373029 393 20 0.030896459 0.038042585 0.578133338 Wax biosynthesis 1372945 283 15 0.019386958 0.03893047 0.578133338 Aflatoxin activation and detoxification 1373056 861 55 0.371851185 0.049526822 0.665393893 SUMOylation 1372466 "C: GeneSet analysis for ""Interaction""" setID setSize setScore P FDR setName setID.orig 872 12 1.000003495 0.001764998 0.353955531 Cargo concentration in the ER 1372455 479 472 2.16101606 0.002439998 0.353955531 Metabolism of lipids and lipoproteins 1372856 1005 13 0.000234382 0.017275802 0.779964379 Signal transduction by L1 1372321 361 58 0.56866835 0.022052078 0.779964379 Metabolism of nucleotides 1372977 1801 46 0.438309952 0.028483175 0.779964379 Peroxisome* 131126 1806 69 0.653508571 0.029338726 0.779964379 Ribosome biogenesis in eukaryotes* 199266 1818 58 0.854868418 0.030388057 0.779964379 RNA degradation* 116127 1692 19 0.358366826 0.030435115 0.779964379 Glycerolipid metabolism* 361 888 10 0.004319576 0.031849801 0.779964379 Post-translational modification: synthesis of GPI-anchored proteins* 1372439 238 19 0.015985834 0.034306438 0.779964379 Endosomal Sorting Complex Required For Transport (ESCRT) 1373104 345 12 4.13E-05 0.040291998 0.83111208 Vitamin B5 (pantothenate) metabolism 1372993 673 18 0.473578638 0.047226843 0.885943678 Processing of Intronless Pre-mRNAs 1372656