%!PS-Adobe-3.1 Ptrich LG BET3 LG DOM? Freq allele 1 (alba/tremula) Freq allele 2 (alba/tremula) Odd-ratio allele 1 (alba/tremula) Odd-ratio allele 2 (alba/tremula) Test result allele 1 Test result allele 2 ASP302 ASP113302 H 1 0.041/0.067 0.412/0.163 0.81/1.36 1.45/0.4 NS ALBA ASP322 ASP112322 H 6 0/0.566 0.24/0 0/5.17 1.73/0 TREMULA ALBA ASP376 ASP112376 H 1 0.768/0.046 0/0.231 3.18/0.05 0/3.34 ALBA TREMULA ASP933 ASP106933 F 6 0/0.066 0.745/0 0/2.98 3.12/0 TREMULA ALBA G1037 GCPM 1037 N 11 0.814/0.63 0.814/0.63 1.45/0.56 1.45/0.56 ALBA ALBA G1065 GCPM 1065 F 6 0.005/0.26 0/0 0/39.8 0/0 TREMULA NS G1074 GCPM 1074 F 6 0/0.954 1/0.046 0/39.8 0/0.03 TREMULA ALBA G1133 GCPM 1133 H 3 0.006/0.735 0/0 0.02/7.02 0/0 TREMULA NS G114 GCPM 114 N 10 0.995/0.064 0.995/0.064 86.34/0.03 86.34/0.03 ALBA ALBA G1158 GCPM 1158 M 2 0.484/0.925 0.484/0.925 0.53/6.86 0.53/6.86 TREMULA TREMULA G1186 GCPM 1186 H 12 0/0.725 0/0 0/7.79 0/0 TREMULA NS G1192 GCPM 1192 F 5 0.552/0 0.297/1 1.35/0 0.66/0 ALBA TREMULA G124 GCPM 124 F 1 0.99/0.144 0.005/0.125 42.2/0.07 0.11/2.9 ALBA TREMULA G1250 (216) GCPM 1250 F 10 0.936/0.136 0.064/0.864 4.03/0.04 0.25/23.05 ALBA TREMULA G1255 GCPM 1255 F 5 0/1 1/0 0/0 0/0 TREMULA ALBA G1260 GCPM 1260 N 7 0.011/0.51 0.011/0.51 0.05/4.48 0.05/4.48 TREMULA TREMULA G1274 GCPM 1274 H 1 dom 0.735/0.043 0.031/0.609 1.82/0.03 0/0 ALBA missing data (allele 0)? G1292 (99) GCPM 1292 F 14 1/0 0/1 0/0 0/0 ALBA TREMULA G1295 (250) GCPM 1295 F 7 dom 0.798/0.043 0.202/0.957 2.13/0.02 0.47/40.78 ALBA TREMULA G1306 GCPM 1306 N 14 dom 0/0 0/0 0/0 0/0 NS NS G1353 GCPM 1353 M 13 0.896/0.294 0/0 3.92/0.19 0/0 ALBA NS G1376 GCPM 1376 N 2 0.935/0.213 0.935/0.213 6.42/0.12 6.42/0.12 ALBA ALBA G1381(264) GCPM 1381 N 17 dom 0.168/1 0.168/1 0.41/0 0.41/0 TREMULA TREMULA G139 GCPM 139 F 6 0.576/0 0/0 2.13/0 0/0 ALBA NS G1416 GCPM 1416 N 3 0.969/0.978 0.969/0.978 0.94/1.36 0.94/1.36 NS NS G1454 GCPM 1454 H 15 0/0.281 0.309/0.531 0/3.72 0.72/1.82 TREMULA TREMULA G1485 GCPM 1485 N 6 0.964/0.99 0.964/0.99 0.74/2.83 0.74/2.83 NS NS G154 GCPM 154 F 12 dom 0/0.028 0/0 0/2.79 0/0 TREMULA NS G1568 GCPM 1568 X 1 #VALUE! #VALUE! 0/0 0/0 NS NS G1574 GCPM 1574 F 10 1/0 0/0.029 0/0 0/2.84 ALBA TREMULA G1577 GCPM 1577 H 18 0.005/0.971 0.321/0 0.01/63.36 1.79/0 TREMULA ALBA G1608 GCPM 1608 H 15 0/0 0.346/0 0/0 1.85/0 NS ALBA G162 GCPM 162 H 13 0.016/0 0/0.265 1.52/0 0/3.67 NS TREMULA G1629 GCPM 1629 H 3 0.211/0.682 0.042/0 0.62/5.02 1.24/0 TREMULA NS G1688 GCPM 1688 H 3 0.447/0.133 0.237/0.75 2.36/0.45 0.25/2.44 ALBA TREMULA G1719 GCPM 1719 M 1 0.613/0.255 0.613/0.255 1.61/0.35 1.61/0.35 ALBA ALBA G1809 GCPM 1809 N 4 1/0.418 1/0.418 0/0.18 0/0.18 ALBA ALBA G1812 GCPM 1812 N 14 dom 0.098/0.402 0.031/0.314 0.43/2.64 0.22/3.1 TREMULA TREMULA G1831 GCPM 1831 H 6 0/0.167 0.016/0.029 0/3.21 0.77/1.43 TREMULA NS G1838 GCPM 1838 M 5 0.813/0.234 0.813/0.234 2.63/0.19 2.63/0.19 ALBA ALBA G1869 GCPM 1869 N 3 0.011/0 0.038/0 1.49/0 1.51/0 NS ALBA G1887 (175) GCPM 1887 N 3 dom 0/0 0/0 0/0 0/0 NS NS G1894 GCPM 1894 F 15 0/0.98 0.818/0 0/97 3.86/0 TREMULA ALBA G1949 GCPM 1949 N 9 0.619/0.263 0.619/0.263 1.4/0.31 1.4/0.31 ALBA ALBA G20 GCPM 20 N 5 0.913/0.981 0.913/0.981 0.71/3.49 0.71/3.49 TREMULA TREMULA G2014 (207) GCPM 2014 N 14 dom 1/1 1/1 0/0 0/0 NS NS G2020 GCPM 2020 H 10 0.247/0 0/0.585 1.73/0 0/5.41 ALBA TREMULA G2034 GCPM 2034 H 6 0/0.923 0/0 0/25.5 0/0 TREMULA NS G2062 GCPM 2062 F 8 0.637/0 0.047/0.222 2.57/0 0.4/2.29 ALBA TREMULA O16 (253) ORPM 16 H 13 dom 0.563/0.217 0.438/0.783 1.31/0.28 0.76/3.54 ALBA TREMULA O190 ORPM 190 F 6 0.828/0 0/0.74 4.15/0 0/8.11 ALBA TREMULA O203 ORPM 203 N 3 0.955/0.454 0.955/0.454 6.5/0.25 6.5/0.25 ALBA ALBA O23 ORPM 23 H 9 0/0.314 0.04/0 0/3.49 1.61/0 TREMULA ALBA O26 ORPM 26 H 6 0.577/0 0.005/0.98 2.32/0 0.01/90.59 ALBA TREMULA O268 ORPM 268 M 8 0.295/0 0/0 1.81/0 0/0 ALBA NS O369 ORPM 369 M 6 0.691/0.068 0.691/0.068 1.65/0.05 1.65/0.05 ALBA ALBA O374 ORPM 374 F 8 0/0 0/0 0/0 0/0 NS NS ORPM_127 ORPM 127 F 4 0.983/0.556 0/0.133 11.18/0.24 0/3.31 ALBA TREMULA ORPM_137 ORPM 137 N 1 0.969/0 0.969/0 14/0 14/0 ALBA ALBA ORPM_14 ORPM 014 N 16 0.959/0.943 0.959/0.943 1.14/0.82 1.14/0.82 NS NS ORPM_149 ORPM 149 F 10 0/0.327 0.959/0 0/3.8 14/0 TREMULA ALBA ORPM_167 ORPM 167 F 6 0/0.991 0.984/0 0/191 37/0 TREMULA ALBA ORPM_202 ORPM 202 F 8 0.954/0.69 0/0.01 3.25/0.35 0/2.98 ALBA NS ORPM_206 ORPM 206 F 19 0.944/0.373 0/0 5.66/0.2 0/0 ALBA Could not be a 208 bp? ORPM_21 ORPM 021 N 9 1/1 1/1 0/0 0/0 NS NS ORPM_214 ORPM 214 F 18 0/0.721 1/0.087 0/7.76 0/0.04 TREMULA ALBA ORPM_220 ORPM 220 F 4 0/0.259 1/0.009 0/3.45 0/0.01 TREMULA ALBA ORPM_28 ORPM 028 M 18 0.375/0.923 0.375/0.923 0.46/9.14 0.46/9.14 TREMULA TREMULA ORPM_29 ORPM 29 11 #VALUE! #VALUE! 0/0 0/0 NS NS ORPM_30a ORPM 030_2 M 1 1/0.755 1/0.755 0/0.29 0/0.29 ALBA ALBA ORPM_30b ORPM 030_1 3 0.253/0.404 0.253/0.404 0.77/1.54 0.77/1.54 TREMULA TREMULA ORPM_312 ORPM 312 H 7 0.386/0.11 0.157/0.05 2.18/0.43 1.79/0.51 ALBA TREMULA ORPM_344 ORPM 344 F 10 0/0.343 0.758/0.259 0/3.73 2.27/0.25 TREMULA ALBA ORPM_60 ORPM 060 F 6 0.732/0.065 0.041/0.824 2.8/0.07 0.09/9.9 ALBA TREMULA P_2852 PMGC 2852 H 1 0.009/0 0/0 1.55/0 0/0 NS NS W17 WPMS 17 N 7 #VALUE! #VALUE! 0/0 0/0 NS NS WPMS_05 WPMS 05 F 12 0.397/0 0/0.06 1.85/0 0/3.06 ALBA TREMULA WPMS_15 WPMS 15 F 5 0/0.088 0.015/0 0/3.11 1.53/0 TREMULA NS ORPM 276 F 19 dom ORPM 376 H 8 ORPM 430 N 15 dom AP2 M 6 PIP H 3 ASL1 F 6 Dehyd F 4 Endo F 14 Glut (GAD) F 4 dom Per1 F 5 dom PhyA F 13 PhyB F 8 Phen F 6 SOS2 N 18 Thau H 9